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Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009606134.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | WRKY | ||||||||
Protein Properties | Length: 283aa MW: 31136.6 Da PI: 8.1256 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 96.2 | 2.3e-30 | 97 | 156 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+ XP_009606134.1 97 MNDGCHWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCVEDMSILITTYEGTHNHP 156 58***************************99****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.5E-32 | 82 | 158 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 7.85E-28 | 91 | 158 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 29.207 | 92 | 158 | IPR003657 | WRKY domain |
SMART | SM00774 | 3.5E-36 | 97 | 157 | IPR003657 | WRKY domain |
Pfam | PF03106 | 5.6E-27 | 98 | 156 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 283 aa Download sequence Send to blast |
MNKRTHSPAS QENDIGDGEL ALSLTLLSSG SNASKVEADE ERKKKQEDAT TTGYLPIQSS 60 NNSHGSNFGG ITSQVMNSPP NRKARVSIRA KCEAATMNDG CHWRKYGQKI AKGNPCPRAY 120 YRCTVAPGCP VRKQVQRCVE DMSILITTYE GTHNHPLPVA MASTAGSFTL VDSSINPLLS 180 NGTSNLLNET FFPSPYHIIN SSSSPYTSNL RNNLYNHEQY PIVNSFSNTS LSEAAQLGNS 240 WFPKPSNYER NTIGNNIFTA YKLADIIHNE MGPQFEGNNN NYM |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 4e-22 | 84 | 158 | 1 | 74 | WRKY transcription factor 1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009606133.1 | 0.0 | PREDICTED: probable WRKY transcription factor 9 | ||||
Refseq | XP_009606134.1 | 0.0 | PREDICTED: probable WRKY transcription factor 9 | ||||
Swissprot | Q9C9F0 | 1e-58 | WRKY9_ARATH; Probable WRKY transcription factor 9 | ||||
TrEMBL | M1CX14 | 2e-77 | M1CX14_SOLTU; Uncharacterized protein | ||||
STRING | PGSC0003DMT400076591 | 5e-77 | (Solanum tuberosum) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68150.1 | 2e-58 | WRKY DNA-binding protein 9 |